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    nxpe3l neurexophilin and PC-esterase domain family, member 3-like [ Danio rerio (zebrafish) ]

    Gene ID: 100006634, updated on 13-Apr-2024

    Summary

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    Official Symbol
    nxpe3lprovided by ZNC
    Official Full Name
    neurexophilin and PC-esterase domain family, member 3-likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-091117-36
    See related
    AllianceGenome:ZFIN:ZDB-GENE-091117-36
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:ch211-157j23.3
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: 24
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (5814540..5816222)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (5785195..5786403)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene si:ch211-157j23.2 Neighboring gene NXPE family member 3-like Neighboring gene si:ch211-157j23.5 Neighboring gene transient receptor potential cation channel, subfamily C, member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    NXPE family member 3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001386572.1 → NP_001373501.1  NXPE family member 3-like

      Status: VALIDATED

      Source sequence(s)
      BX470065, BX470196
      Conserved Domains (1) summary
      pfam06312
      Location:121 → 274
      Neurexophilin

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      5814540..5816222
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    2. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      5818227..5824226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017353862.2 → XP_017209351.2  NXPE family member 3-like

      UniProtKB/TrEMBL
      A0A8M6Z437
      Conserved Domains (1) summary
      pfam06312
      Location:22 → 207
      Neurexophilin
    Nucleotide Protein Strain
    Heading Accession and Version

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